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Mac OS X
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To install doxygen and dot: 
brew install doxygen dot
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doxyqml:
https://github.com/agateau/doxyqml
$sudo pip3 install doxyqml
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Then to generate the html, run the following code while you are in the qgroundcontrol/doc directory:
$doxygen Doxyfile

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The html file index.html should be in doc/html. 
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